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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015859383.1_cds_XP_016514312.1_26777
CDS Infomation

[gene=LOC107831099] [db_xref=GeneID:107831099] [protein=acyltransferase-like protein At1g54570, chloroplastic isoform X2] [protein_id=XP_016514312.1] [location=join(11929..11978,12119..12174,12914..13072,13167..13271,13734..13840,14310..14431,15184..15292,16301..16431,18854..19223,20626..20739,21090..21187,21313..21613)] [gbkey=CDS]
Sequence

ATGGATGGCACTGGTTTGGGTCTTGTTTTACATGAGAAGGCTCTTGGGAAAGTTTTTCAG
GTTTGGTGCTTGCATATTCCTGTGTATGATCGAACACCATTTGAAGAACTGGTGGAATAT
GTCGAGGAAACTGTGAAGATGAGGCATGCTTCATCTCCAAACAAGCCTATTTATTTAGTT
GGAGATTCATTTGGAGGGTGCTTGGCTCTTGCTGTTGCTGCTCGTAACCCTAAGATTGAC
CTTGTTCTTATATTAGCTAATCCAGCAACTTCATTTGGCAGGACGCCTCTCCAACCTTTG
CTTCCTCTTCTAGAGTCTTTGCCTGATGAATTTCATGTGACAGTCCCTTATCTTTTGAGC
TTTATTATGGGTGATCCAATGAAGATGGCGATGGTTAACATTGATTCCATGCTTCCTCCT
AGACAAATTATTCAACATCTCTCTGACAACCTCACTGCTTTCCTGGTCCACCTTTCTGGT
GTGGCTGATATTATACCAAAGGAAACTCTTCTCTGGAAGTTGAAGCTTCTTAGATCTGCT
TCATCTTATTCAAATTCCCGTCTCCATGCTGTTAACGCTGAAGTACTTATGCTTGCTAGT
GGCAAGGACAACATGCTTCCAAGTGCAAATGAAGCTCAGAGGCTAGCAAGTTCATTAAGA
AACTGCAAAGTACGGTACTTCAAAGACAATGGACATGCTATTTTATTGGAAGATGGTATT
AATCTGCTATCCATCATCAAAGGTACTAGTAAATATCGTCATTCAAAAAGGCATGATTAT
GTCATGGATTTTCTGCCTCCTAGTATGTCAGAGTTCAAGAAAGCAGTCCAGGACTTTAGA
TGGTATATCAATTTTACTGGTTCAGTTATGTTATCCACAATGGAAAATGGGAAAATTGTA
AGAGGTCTAGCAGGGGTCCCATGTGAAGGCCCTGTATTGTTGGTTGGTTATCACATGCTT
ATGGGTTTAGAAGTAATCCCTCTTGTTGAAGAATATTTGAGGCAGAAGAAAATTTTACTT
CGTGGTATAGCACATCCAACATTGTTCACTCAGCTGATTGAGAGTGAAACTAACGAAAGT
TCAATCTTTGATATGCTGAGACTATATGGAGCTACGCCTGTCACTGCCAGCAACTTTTTT
AAGTTGCTTGCAACAAAGTCACATGTTCTGCTGTATCCTGGTGGTGCCCGTGAGGCCTTA
CATCGTAAGGGAGAAGAGTACAAGGTGATTTGGCCTGACCAACCAGAATTCATCAGAATG
GCTGCAAGATTTGGTGCGACAATTGTGCCATTTGGCGTTGTTGGGGAAGATGATATAGCA
CAGTTAGTTCTCGACTATGACGACCTAAAAAAGATTCCTATATTGAGTGATCAGATAAGG
CGTGACAACGAACTGGCAGCGAGGATGGGTGTAACAGTCAGGAGGGACATGACTGGGGAG
GTTGCCAACCAAACGTTGTATCTCCCGGGCATTTTACCTAAGGTACCCGGTCGTTTTTAC
TACTTGTTTGGAAAACCTATTCATACAAAGGGAAGGCAGGACTTGTTGAAAGACAGAGAG
AAAGCAAGAGAATTGTACTTGCATATAAAATATGAAGTTCAAAATAGCGTGAATTATTTG
CTTAAGAAAAGAGAGGAGGATCCTTACCGAAGCGTCATTGATCGGACCACATATAGAGCA
TTTTCTGCTACTTTTGATGATGTCCCAACATTTGATTATTAG

Peptide Sequence

PEP ID

XP_016514312.1
PEP Infomation

PREDICTED: acyltransferase-like protein At1g54570, chloroplastic isoform X2 [Nicotiana tabacum]
Sequence

MDGTGLGLVLHEKALGKVFQVWCLHIPVYDRTPFEELVEYVEETVKMRHASSPNKPIYLV
GDSFGGCLALAVAARNPKIDLVLILANPATSFGRTPLQPLLPLLESLPDEFHVTVPYLLS
FIMGDPMKMAMVNIDSMLPPRQIIQHLSDNLTAFLVHLSGVADIIPKETLLWKLKLLRSA
SSYSNSRLHAVNAEVLMLASGKDNMLPSANEAQRLASSLRNCKVRYFKDNGHAILLEDGI
NLLSIIKGTSKYRHSKRHDYVMDFLPPSMSEFKKAVQDFRWYINFTGSVMLSTMENGKIV
RGLAGVPCEGPVLLVGYHMLMGLEVIPLVEEYLRQKKILLRGIAHPTLFTQLIESETNES
SIFDMLRLYGATPVTASNFFKLLATKSHVLLYPGGAREALHRKGEEYKVIWPDQPEFIRM
AARFGATIVPFGVVGEDDIAQLVLDYDDLKKIPILSDQIRRDNELAARMGVTVRRDMTGE
VANQTLYLPGILPKVPGRFYYLFGKPIHTKGRQDLLKDREKARELYLHIKYEVQNSVNYL
LKKREEDPYRSVIDRTTYRAFSATFDDVPTFDY

Transcript Sequence

Gene sequence data has not been registered.